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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EcS504134.10 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus
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Family | G2-like | ||||||||
Protein Properties | Length: 110aa MW: 12643.7 Da PI: 11.5502 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 94.5 | 8.1e-30 | 53 | 102 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ EcS504134.10 53 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ 102 9************************************************* PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 8.42E-15 | 50 | 106 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.9E-26 | 51 | 102 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.4E-22 | 53 | 104 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 1.2E-6 | 54 | 102 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 110 aa Download sequence Send to blast |
RFGGLSAYQL HQYHHHHHHH SQYAVIGSSE ASHGMMRSRF VSKLPVKRSM RAPRMRWTST 60 LHARFVHAVE LLGGHERATP KSVLELMDVK DLTLAHVKSH LQVIIITRSK |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010062307.1 | 3e-67 | PREDICTED: transcription repressor KAN1 isoform X1 | ||||
Refseq | XP_010062308.1 | 3e-67 | PREDICTED: transcription repressor KAN1 isoform X2 | ||||
Swissprot | Q93WJ9 | 1e-40 | KAN1_ARATH; Transcription repressor KAN1 | ||||
TrEMBL | A0A059BU05 | 3e-67 | A0A059BU05_EUCGR; Uncharacterized protein | ||||
TrEMBL | A0A059BUZ6 | 3e-67 | A0A059BUZ6_EUCGR; Uncharacterized protein | ||||
STRING | POPTR_0017s02220.1 | 1e-46 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM6606 | 26 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G16560.1 | 1e-38 | G2-like family protein |